[1]俞正玉,张碧成,张强,等.鲜奶中肠出血性大肠杆菌O157∶H7的定量PCR检测[J].江苏农业学报,2015,(05):1173-1178.[doi:doi:10.3969/j.issn.1000-4440.2015.05.036]
 YU Zheng-yu,ZHANG Bi-cheng,ZHANG Qiang,et al.Development of a real-time PCR for detection of enterohemorrhagic Escherichia coli O157∶H7 in milk[J].,2015,(05):1173-1178.[doi:doi:10.3969/j.issn.1000-4440.2015.05.036]
点击复制

鲜奶中肠出血性大肠杆菌O157∶H7的定量PCR检测()
分享到:

江苏农业学报[ISSN:1006-6977/CN:61-1281/TN]

卷:
期数:
2015年05期
页码:
1173-1178
栏目:
加工贮藏·质量安全
出版日期:
2015-10-31

文章信息/Info

Title:
Development of a real-time PCR for detection of enterohemorrhagic Escherichia coli O157∶H7 in milk
作者:
俞正玉张碧成张强汪伟何孔旺倪艳秀温立斌李彬周萍张雪寒
(江苏省农业科学院兽医研究所/农业部兽用生物制品工程技术重点实验室/国家兽用生物制品工程技术研究中心,江苏南京210014)
Author(s):
YU Zheng-yuZHANG Bi-chengZHANG QiangWANG WeiHE Kong-wangNI Yan-xiuWEN Li-binLI BinZHOU PingZHANG Xue-han
(Institute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences/Key Laboratory of Engineering Research of Veterinary Bio-products of Agricultural  Ministry/National Center for Engineering Research of Veterinary Bio-products, Nanjing 210014, China)
关键词:
肠出血性大肠杆菌O157∶H7荧光定量PCR鲜奶
Keywords:
enterohaemorrhagic Escherichia coli O157∶H7real time fluorescence quantitative PCRmilk
分类号:
S851.34+7.502
DOI:
doi:10.3969/j.issn.1000-4440.2015.05.036
文献标志码:
A
摘要:
为建立鲜奶中肠出血性大肠杆菌(Enterohaemorrhagic E. coli, EHEC)O157∶H7的特异性检测方法,以EHEC O157∶H7独有的遗传标志性基因Z0372为靶序列设计引物和探针,以梯度稀释的含有Z0372基因的重组质粒作为标准品进行Taqman荧光定量PCR反应,分析该方法的敏感性、特异性,并检测鲜奶样品以验证Taqman荧光定量 PCR实用性和可靠性。结果表明,建立的定量PCR方法在1 μl 1×101拷贝至1 μl 1×106拷贝之间具有良好的线性关系,相关系数达到0.996,扩增效率112%。该方法的检测灵敏度为1 μl 70拷贝,敏感性较高,而且特异性良好,与其他血清型大肠杆菌、沙门氏杆菌和志贺氏菌等易混淆菌株核酸之间没有交叉反应。批间和批内检测的变异系数(RSD)低于2%,表明该方法重复性良好。
Abstract:
To develop a real-time PCR (RT-PCR) technique for detection of enterohaemorrhagic Escherichia coli (EHEC) O157∶H7 in milk, primers and probes were designed according to the unique Z0372 gene sequence, a genetic marker of EHEC O157∶H7, and the serially diluted recombinant plasmid pMD18-T-Z0372 was used as a standard template to develop RT-PCR assay. The concentration of stantard plasmid exhibited a good linear relationship with Ct within the range of 1×101-1×106copies per microlitre by developed RT-PCR, with the correlation coefficient being 0.996 and the amplification efficiency being 112%. The RT-PCR assay showed a detection limit as low as 70 copies per microlitre and no cross reaction with other E.coli serotypes, Salmonella and Shigella, indicative of good sensitivity and speificity. The coefficients of variation within and among batches were lower than 2%, suggestive of good repeatability.

参考文献/References:

[1]MEAD P S. Food-related illness and death in the United States [J]. Emerging Infectious Disease, 1999,5:607-625.
[2]张雪寒,栾晓婷,何孔旺,等. 肠出血性大肠杆菌O157∶H7 toxB基因的分片段克隆和表达[J]. 江苏农业学报, 2014,30(6):1392-1395.
[3]RILEY L W, REMIS R S, HELGERSON S D, et al. Hemorrhagic colitis associated with a rare Escherichia coli serotype [J]. The New England Journal of Medicine, 1983, 308:510-681.
[4]SHINAGAWA K, KANEHIRA M ,OMOE K, et a1. Frequency of Shiga toxin-producing Escherichia coli in cattle at a breeding farm and at a slaughterhouse in Japan [J]. Veterinary Microbiology, 2000,76(3):305-309.
[5]汪华. 肠出血性大肠杆菌O157∶H7流行特征和控制对策研究[J]. 医学研究通讯,2005,34(5):24-25.
[6]MARCH S B, RATNAM S. Sorbitol-MacConkey medium for detection of Escherichia coli O157∶H7 associated with hemorrhagic colitis [J]. Journal of Clinical Microbiology,1986, 23:869-872.
[7]ZADIK P M, CHAPMAN P A, SIDDONS C A. Use of tellurite for the selection of verocytotoxigenic Escherichia coli O157[J]. J Med Microbiology, 1993, 39:155-158.
[8]GANNON V P, KING R K, KIM J Y, et al. Rapid and sensitive method for detection of Shiga-like toxin-producing Escherichia coli in ground beef using the polymerase chain reaction[J]. Applied and Environmental Microbiology,1992, 58:3809-3815.
[9]CEBULA T A, PAYNE W L, FENG P. Simultaneous identification of strains of Escherichia coli serotype O157∶H7 and their Shiga-like toxin type by mismatch amplification mutation assay-multiplex PCR[J]. Journal of Clinical Microbiology,1995,33: 248-250.
[10]李丽,张雪寒,何孔旺,等,EHEC O157∶H7二重PCR的建立及应用[J]. 华北农学报,2011,26(6):1-8.
[11]TEVFIK D M. Real-time PCR [M].UK:Taylor & Francis Group, 2006: 1-18.
[12]BACH S J, MCALLISTER T A, VEIRA D M, et a1. Transmission and control of Escherichia coli O157∶H7-A review [J]. Canadian Journal of Animal Science, 2002,8(2):475-490.
[13]GANNON V P J, GRAHAM T A, KING I T, et al. Escherichia coli O157∶H7 infection in cows and calves in a beef cattle herd in Alberta, Canada [J]. Epidemiology and Infection, 2002, 29(1):163-172.
[14]DEISINGH A K, THOMPSON M. Strategies for the detection of Escherichia coli O157∶H7 in foods[J]. Journal Applied Microbiology, 2004, 96:419-429.
[15]GANNON V P, KING R K, KIM J Y, et al. Rapid and sensitive method for detection of Shiga-like toxin-producing Escherichia coli in ground beef using the polymerase chain reaction [J]. Applied and Environmental Microbiology, 1992, 58:3809-3815.
[16]BARLETTA F. Validation of five-colony pool analysis using multiplex real-time PCR for detection of diarrheagenic Escherichia coli [J]. Journal Clinical Microbiology, 2009,47:1915-1917.
[17]LI Y, MUSTAPHA A. Simultaneous detection of Escherichia coli O157∶H7, Salmonella, and Shigella in apple cider and produce by a multiplex PCR [J]. Journal of Food Protection, 2004, 67:27-33.
[18]LI B, KOCH W H, CEBULA T A. Detection and characterization of the fimA gene of Escherichia coli O157∶H7 [J]. Molecular Cellular Probes, 1997, 1: 397-406.
[19]DESMARCHELIER P M, BILGE S S, FEGAN N, et al. A PCR specific for Escherichia coli O157 based on the rfb locus encoding O157 lipopolysaccharide [J]. Journal of Clinical Microbiology, 1998, 36:1801-1804.
[20]SHEN Z, HOU N, JIN M, et al. A novel enzyme-linked immunosorbent assay for detection of Escherichia coli O157∶H7 using immunomagnetic and beacon gold nanoparticles [J]. Journal of Food Protection, 2012, 75(8):1373-1381.
[21]IBEKWE A M, WATT P, GRIEVE C M, et al. Multiplex fluorogenic real-time PCR for detection and quantification of Escherichia coli O157∶H7 in dairy wastewater wetlands [J]. Applied and Environmental Microbiology, 2002,68:4853-4862.
[22]KARNS J S, VAN KESSE J S, MCCLUSKY B J, et al. Incidence of Escherichia coli O157∶H7 and E. coli virulence factors in US bulk tank milk as determined by polymerase chain reaction [J]. Journal of Dairy Science, 2007, 90 (7):3212-3219.
[23]WU C F, VALDES J J, BENTLEY W E, et al. DNA microarray for discrimination between pathogenic O157∶H7 EDL933 and non-pathogenic Escherichia coli strains [J]. Biosens Bioelectron, 2003, 19(1):1-8.
[24]JIN D Z, XU X J, CHEN S H, et al. Detection and identification of enterohemorrhagic Escherichia coli O157∶H7 and Vibrio cholera O139 using oligonucleotide microarray[J]. Infectious Agent Cancer, 2007,23(2):1-10.
[25]WOLTER A, NIESSNER R, SEIDEL M. Detection of Escherichia coli O157∶H7, Salmonella typhimurium, and Legionella pneumophila in water using a flow-through chemiluminescence microarray readout system[J]. Analytical Chemistry, 2008, 80 (15):5854-5863. 〖ZK)〗〖FL)〗

相似文献/References:

[1]孟春花,王春玲,李静心,等.猪APOBEC3F基因真核表达载体的构建及其在MARC145细胞中的表达定位[J].江苏农业学报,2015,(06):1344.[doi:doi:10.3969/j.issn.1000-4440.2015.06.023]
 MENG Chun-hua,WANG Chun-ling,LI Jing-xin,et al.Construction of eukaryotic vector for porcine APOBEC3F gene and its expression and localization in MARC145 cells[J].,2015,(05):1344.[doi:doi:10.3969/j.issn.1000-4440.2015.06.023]
[2]田鹏,苏艳丽,康保珊,等.两个红梨品种花色苷合成相关基因及转录因子MYB10 表达模式分析[J].江苏农业学报,2015,(01):166.[doi:10.3969/j.issn.1000-4440.2015.01.026]
 TIAN peng,SU Yan-li,KANG Bao-shan,et al.Analyses of expression patterns of transcription factor MYB10 and anthocyanin synthesis genes in two red skin pear varieties[J].,2015,(05):166.[doi:10.3969/j.issn.1000-4440.2015.01.026]
[3]戴忠良,陈丽,山溪,等.甘蓝晚抽薹基因BoFLC3克隆、序列分析和亚细胞定位[J].江苏农业学报,2018,(06):1324.[doi:doi:10.3969/j.issn.1000-4440.2018.06.018]
 DAI Zhong-liang,CHEN Li,SHAN Xi,et al.Cloning, sequence analysis and subcellular localization of Brassica oleraceaBoFLC3 gene[J].,2018,(05):1324.[doi:doi:10.3969/j.issn.1000-4440.2018.06.018]
[4]吴双,张聪,袁慧莎,等.血清4型禽腺病毒TaqMan探针实时荧光定量PCR检测方法的建立与应用[J].江苏农业学报,2023,(01):134.[doi:doi:10.3969/j.issn.1000-4440.2023.01.016]
 WU Shuang,ZHANG Cong,YUAN Hui-sha,et al.Establishment and application of quantitative real-time PCR detection method for fowl aviadenovirus serotype 4 based on TaqMan probe[J].,2023,(05):134.[doi:doi:10.3969/j.issn.1000-4440.2023.01.016]
[5]郭梦鸽,秦孝天,陈瑞丹.6个朱砂梅品种花色苷合成结构基因及转录因子编码基因的表达模式分析[J].江苏农业学报,2024,(02):367.[doi:doi:10.3969/j.issn.1000-4440.2024.02.019]
 GUO Meng-ge,QIN Xiao-tian,CHEN Rui-dan.Analysis of the expression pattern of structural genes and transcription factors encoding genes related to the anthocyanin synthesis in six cultivars of Prunus mume Cinnabar Purple Group[J].,2024,(05):367.[doi:doi:10.3969/j.issn.1000-4440.2024.02.019]

备注/Memo

备注/Memo:
收稿日期:2015-04-05 基金项目:国家自然科学基金项目(31572503);农业部948项目(2014-S17) 作者简介:俞正玉(1978-),男,江苏南京人,学士,助理研究员,从事人兽共患病研究。 通讯作者:张雪寒,(E-mail)liuxuehan1996@hotmail.com
更新日期/Last Update: 2015-10-31