[1]印志同,秦秋霞,阚欣,等.玉米快速叶绿素荧光参数全基因组关联分析[J].江苏农业学报,2016,(04):746-751.[doi:10.3969/j.issn.100-4440.2016.04.005]
　YIN Zhi-tong,QIN Qiu-xia,KAN Xin,et al.Genome-wide association analysis of fast chlorophyll fluorescence parameters in maize[J].,2016,(04):746-751.[doi:10.3969/j.issn.100-4440.2016.04.005]
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玉米快速叶绿素荧光参数全基因组关联分析()
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江苏农业学报[ISSN:1006-6977/CN:61-1281/TN]

卷:
期数:
2016年04期
页码:
746-751
栏目:
遗传育种·生理生化
出版日期:
2016-10-31

文章信息/Info

Title:
Genome-wide association analysis of fast chlorophyll fluorescence parameters in maize
作者:
印志同; 秦秋霞; 阚欣; 陈雅楠; 成前; 邓德祥
扬州大学江苏省作物遗传生理国家重点实验室培育点/植物功能基因组学教育部重点实验室/粮食作物现代产业技术协同创新中心，江苏 扬州 225009
Author(s):
YIN Zhi-tong; QIN Qiu-xia; KAN Xin; CHEN Ya-nan; CHENG Qian; DENG De-xiang
Key Laboratory of Crop Genetics and Physiology of Jiangsu Province，Key Laboratory of Plant Functional Genomics of MOE/ Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University，Yangzhou 225009，China
关键词:
玉米; 快速叶绿素荧光参数; 关联分析; 自交系; SNP标记
Keywords:
maize;  fast chlorophyll fluorescence parameters (JIP parameters);  association analysis;  inbred line;  singlenucleotide polymorphism (SNP) marker
分类号:
S513.035.3
DOI:
10.3969/j.issn.100-4440.2016.04.005
文献标志码:
A
摘要:
快速叶绿素荧光参数可以准确快速地探测植株光能转化利用效率。以404份玉米自交系组成的自然群体为材料，利用5.6×105个覆盖全基因组的SNP标记，对5个叶绿素荧光参数进行全基因组关联分析。在4个大田种植环境下，共检测到41个与快速叶绿素荧光参数显著关联的SNP位点，其中8个SNP位点与ETo/TRo显著关联，6个SNP位点与ABS/CSo显著关联，18个SNP位点与TRo/ABS显著关联，4个SNP位点与ETo/CSo显著关联，5个SNP位点与PIcs显著关联。研究结果对于挖掘玉米叶绿素荧光参数相关基因，揭示光合作用遗传机理和开展分子标记辅助选择具有重要意义。
Abstract:
Fast chlorophyll fluorescence parameters are widely used to characterize the photosynthetic efficiency of plants. In this study, the genomewide association analysis was used to detect key singlenucleotide polymorphisms (SNPs) associated with fast chlorophyll fluorescence parameters using more than 560 000 SNPs in a maize panel consisting of 404 inbred lines. In four field environments, 41 SNPs were detected to be associated with five fast chlorophyll fluorescence parameters, including ABS/CSo, ETo/CSo,TRo/ABS,ETo/TRo, andPIcs. Among these identified SNPs which was 8, 6, 18, 4, and 5 SNPs were significantly associated with ETo/TRo, ABS/CSo,TRo/ABS, ETo/CSo, and PIcs respectively. These significant SNPs will help discover genes for chlorophyll fluorescence parameters, better understand the genetic basis of photosynthesis, and assist in developing marker-assisted selection breeding programs in maize.

参考文献/References:

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备注/Memo

备注/Memo:
收稿日期：2016-05-16基金项目：江苏省自然科学基金项目(BK20141272)；国家自然科学基金项目(31571669、91535106)；江苏省产学研合作前瞻性联合研究项目（BY2016069-09）；江苏省农业科技支撑项目(BE2014353)；江苏省高校优势学科建设项目作者简介：印志同（1972-），男，江苏东海人，博士，副教授，主要从事作物遗传育种研究。（Tel）051487972178；（E-mail）ztyin@yzu.edu.cn通讯作者：邓德祥，（Tel）051487972078;（E-mail）yzdxdeng@126.com
更新日期/Last Update: 2016-11-01