[1]郭保平,牛亚茹,徐明龙,等.AMHR2新型转录本AMHR2-SV1的鉴定及其在大鼠组织中的表达[J].江苏农业学报,2015,(02):394-400.[doi:10.3969/j.issn.1000-4440.2015.02.027]
 GUO Bao-ping,NIU Ya-ru,XU Ming-long,et al.AMHR2-SV1, a novel transcript of AMHR2 and its expression in rat tissues[J].,2015,(02):394-400.[doi:10.3969/j.issn.1000-4440.2015.02.027]
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AMHR2新型转录本AMHR2-SV1的鉴定及其在大鼠组织中的表达()
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江苏农业学报[ISSN:1006-6977/CN:61-1281/TN]

卷:
期数:
2015年02期
页码:
394-400
栏目:
畜牧兽医·水产养殖
出版日期:
2015-04-30

文章信息/Info

Title:
AMHR2-SV1, a novel transcript of AMHR2 and its expression in rat tissues
作者:
郭保平牛亚茹徐明龙徐银学
(南京农业大学动物科学技术学院,江苏南京210095)
Author(s):
GUO Bao-pingNIU Ya-ruXU Ming-longXU Yin-xue
(College of Animal Science and Technology/Nanjing Agricultural University, Nanjing 210095, China)
关键词:
AMHR2AMHR2-SV1新型转录本表达图谱
Keywords:
anti-Müllerian hormone receptor 2(AMHR2)AMHR2-SV1novel transcriptexpression profile
分类号:
Q786
DOI:
10.3969/j.issn.1000-4440.2015.02.027
文献标志码:
A
摘要:
本研究旨在鉴定抗苗勒氏管激素受体2(AMHR2)一种新的转录本,确定其在大鼠组织中的表达情况。采用TRIzol法提取组织总RNA;运用RT-PCR和克隆测序技术分析AMHR2基因的可变剪接体及其在大鼠各组织器官中的表达差异,同时利用NCBI ORF Finder识别剪接体序列阅读框,运用ExPASy-ProtParam和Conserved domains软件分别预测剪接体氨基酸构成及其性质和剪接体保守序列。AMHR2-SV1是AMHR2的一种新型转录本,命名为AMHR2-splice variant(AMHR2-SV1),与AMHR2参考序列比较,缺失第10外显子137 bp。利用NCBI ORF Finder 和ExPASy-ProtParam,预测AMHR2-SV1编码429个氨基酸残基,其编码的蛋白质分子量为45 990.7。Conserved domains在线软件分析表明:AMHR2-SV1蛋白序列比完整AMHR2蛋白序列缺少128个氨基酸,丝氨酸/苏氨酸蛋白激酶结构域不完整。检测结果表明,大鼠组织中均存在AMHR2和AMHR2-SV1两个转录本。在肝、脾、肺、肾、肾上腺和子宫组织中AMHR2表达量均高于AMHR2-SV1,差异达到显著水平;两种转录本在不同组织中表达趋势相同,卵巢中表达量最高,心脏中次之,其他组织表达量均显著低于卵巢和心脏。
Abstract:
A splice variant of anti-Müllerian hormone receptor 2 (AMHR2), AMHR2-splice variant(AMHR2-SV1), was identified by RT-PCR and sequencing techniques. AMHR2-SV1 contains on open reading frame of 76-1 365 bp, encoding 429 amino acids. Sequence alignment revealed an exon 10(137 bp) deletion in AMHR2-SV1. Protein AMHR2-SV1 has a molecular mass of 45 990.7. Compared to the protein sequence of AMHR2, the protein sequence of AMHR2-SV1 missed 128 amino acids, and lost part of the serine/threonine kinase domain. Both AMHR2 and AMHR2-SV1 transcripts were detected in most rat tissues and organs, and the mRNA for the spliced variant was relatively less abundant than AMHR2

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备注/Memo

备注/Memo:
收稿日期:2014-08-27 基金项目:南京农业大学科技发展基金项目(0606F0025) 作者简介:郭保平(1988-),男,山西太原人,硕士研究生,研究方向为动物遗传育种与繁殖。(Tel)18761867090;(E-mail) 2012105038@njau.edu.cn 通讯作者:徐银学,(E-mail) xuyinxue@njau.edu.cn
更新日期/Last Update: 2015-04-30