[1]黄博闻,崔凯,余向阳,等.噻虫嗪胁迫对水稻内生细菌群落结构和多样性的影响[J].江苏农业学报,2021,(06):1370-1377.[doi:doi:10.3969/j.issn.1000-4440.2021.05.002]
 HUANG Bo-wen,CUI Kai,YU Xiang-yang,et al.Effects of thiamethoxam stress on the community composition and diversity of endophytic bacteria in rice[J].,2021,(06):1370-1377.[doi:doi:10.3969/j.issn.1000-4440.2021.05.002]
点击复制

噻虫嗪胁迫对水稻内生细菌群落结构和多样性的影响()
分享到:

江苏农业学报[ISSN:1006-6977/CN:61-1281/TN]

卷:
期数:
2021年06期
页码:
1370-1377
栏目:
遗传育种·生理生化
出版日期:
2021-12-30

文章信息/Info

Title:
Effects of thiamethoxam stress on the community composition and diversity of endophytic bacteria in rice
作者:
黄博闻1崔凯2余向阳12葛静12
(1.江苏大学环境与安全工程学院,江苏镇江212013;2.省部共建国家重点实验室培育基地-江苏省食品质量安全重点实验室,江苏南京210014)
Author(s):
HUANG Bo-wen1CUI Kai2YU Xiang-yang12GE Jing12
(1.School of Environmental and Safety Engineering, Jiangsu University, Zhenjiang 212013, China;2.Jiangsu Key Laboratory for Food Quality and Safety-State Key Laboratory Cultivation Base, Ministry of Science and Technology, Nanjing 210014, China)
关键词:
新烟碱杀虫剂噻虫嗪胁迫水稻内生细菌高通量测序
Keywords:
neonicotinoidsthiamethoxam stressrice endophytic bacteriahigh-throughput sequencing
分类号:
X592
DOI:
doi:10.3969/j.issn.1000-4440.2021.05.002
文献标志码:
A
摘要:
为揭示噻虫嗪对水稻内生细菌群落的影响,采用Illumina HiSeq高通量测序技术对室内盆栽的水稻根、茎、叶内生细菌进行16S rRNA测序。获得用于分析的686 889条优质序列和265个操作分类单元(OTU)。通过α多样性分析发现,土壤噻虫嗪处理对根中内生细菌群落多样性影响显著,对茎、叶影响不明显。在属水平上对代表性OTU进行注释,发现水稻各器官中内生细菌组成受噻虫嗪的影响明显,表明噻虫嗪对水稻内生细菌组成结构影响显著。水稻各器官中内生细菌群落组成与噻虫嗪残留浓度有一定相关性,在水稻茎、叶中,相比于低施用量噻虫嗪处理,内生菌群落在高施用量噻虫嗪处理下改变更明显。
Abstract:
The effects of thiamethoxam stress on endophytic bacterial communities in roots, stems and leaves of rice were studied by Illumina Hiseq high-throughput sequencing technology with indoor pot culture and soil addition treatment. High quality sequences and operational taxons (OTUs) were 686 889 and 265, respectively. The results of α diversity index showed that thiamethoxam had a significant effect on the structure and diversity of endophytic bacterial community in rice roots, but had no significant effect on the diversity of endophytic bacterial community in rice stems and leaves. The representative OTUs were annotated at the genus level. It was found that the composition of endophytic bacteria in rice organs was significantly affected by thiamethoxam, and which was in correlation with the residual level of thiamethoxam. The changes of endophytic bacterial community under the treatment with high application rate of thiamethoxam were more obvious than those under the treatment with low application rate of thiamethoxam in the stems and leaves of rice.

参考文献/References:

[1]MITTER B, BRADER G, PFAFFENBICHLER N, et al. Next generation microbiome applications for crop production ——limitations and the need of knowledge-based solutions [J]. Current Opinion in Microbiology, 2019, 49: 59-65.
[2]ULLAH A, FAHAD S, MUNIS F H. Phytoremediation of heavy metals assisted by plant growth promoting (PGP) bacteria: A review [J]. Environmental and Experimental Botany, 2015, 117: 28-40.
[3]姚领爱,胡之璧,王莉莉,等. 植物内生菌与宿主关系研究进展 [J]. 生态环境学报, 2010, 19(7): 1750-1754.
[4]毛光瑞,翟梅枝,史冠昭,等. 陕西不同生境核桃内生真菌多样性 [J]. 微生物学通报, 2016, 43(6): 1262-1273.
[5]HAMEED A, YEH M W, HSIEH Y T, et al. Diversity and functional characterization of bacterial endophytes dwelling in various rice ( Oryza sativa L.) tissues, and their seed-borne dissemination into rhizosphere under gnotobiotic P-stress [J]. Plant and Soil, 2015, 394(1): 177-197.
[6]GE J, CHENG J, LI Y, et al. Effects of dibutyl phthalate contamination on physiology, phytohormone homeostasis, rhizospheric and endophytic bacterial communities of Brassica rapa var. chinensis [J]. Environmental Research, 2020, 189(4): 109953.
[7]EEVERS N, HAWTHORNE J R, WHITE J C, et al. Exposure of Cucurbita pepo to DDE-contamination alters the endophytic community: A cultivation dependent vs a cultivation independent approach [J]. Environmental Pollution, 2016, 209: 147-154.
[8]李进,张军高,刘鹏飞,等. 4种种衣剂防治棉花苗期主要病虫害效果及经济效益比较 [J]. 植物保护, 2021, 47(1): 241-247.
[9]谭颖,张琪,赵成,等. 蔬菜水果中的新烟碱类农药残留量与人群摄食暴露健康风险评价 [J]. 生态毒理学报, 2016, 11(6): 67-81.
[10]崔凯,葛静,柴阳阳,等. 噻虫嗪对水稻内生真菌群落组成的影响 [J]. 江苏农业学报, 2017, 33(4): 802-808.
[11]ZHANG J, KASSIAN K, TOM F, et al. PEAR: a fast and accurate Illumina Paired-End reAd mergeR [J]. Bioinformatics, 2014, 30(5): 614-620.
[12]GREGORY C J, JUSTIN K, JESSE S, et al. QIIME allows analysis of high-throughput community sequencing data [J]. Nature Methods, 2010, 7(5): 335-336.
[13]JIYOUNG A, RASHMI S, ZHIHENG P, et al. Human gut microbiome and risk for colorectal cancer [J]. Journal of the National Cancer Institute, 2013, 105(24): 1907-1911.
[14]KNIGHT R. PyNAST: a flexible tool for aligning sequences to a template alignment [J]. Bioinformatics, 2010, 26(2): 266-267.
[15]LANGILLE M, ZANEVELD J, CAPORASO J G, et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences [J]. Nature Biotechnology, 2013, 31(9): 814-821.
[16]龙玲,李勇,严煌倩,等. 小松菜对土壤中4种新烟碱类杀虫剂的吸收转运差异 [J]. 江苏农业科学, 2018, 46(7): 205-208.
[17]宋茂鹏,马现永,邓盾,等. 假单胞菌胞外酶降解黄曲霉毒素B-1的酶学性质 [J]. 微生物学通报, 2021, 48(1): 46-56.
[18]TIAN X L, CAO L X, TAN H M, et al. Study on the communities of endophytic fungi and endophytic actinomycetes from rice and their antipathogenic activities in vitro [J]. World Journal of Microbiology & Biotechnology, 2004, 20(3): 303-309.
[19]张晨智. 健康香蕉内生菌群落形成特征及其应用 [D]. 南京:南京农业大学, 2018.
[20]王雅娜,刘洪伟,崔冠慧,等. 高通量测序分析胡萝卜连作与轮作土壤细菌多样性 [J]. 基因组学与应用生物学, 2020, 39(5): 2111-2117.
[21]SINGH R K, MISHRA R, JAISWAL H K, et al. Isolation and identification of natural endophytic rhizobia from rice ( Oryza sativa L.) through rDNA PCR-RFLP and sequence analysis [J]. Current Microbiology, 2006, 52(5): 345-349.
[22]杨亚茹,茆少星,闫淑珍,等. 内生菌荧光假单胞菌DLJ1和蜡状芽胞杆菌SZ5对南方根结线虫胁迫下辣椒植株抗性与产量品质的影响 [J]. 植物保护, 2020, 46(6): 96-102.
[23]王卫强,崔静,吴尚书,等. 石油烃降解菌Pseudomonas sp.及其生物表面活性剂对原油处理效果分析 [J]. 石油学报, 2020, 36(5): 1039-1046.
[24]李争艳,徐智明,李岩,等. 高粱根际微生物研究进展 [J]. 草学, 2021, 4(2): 7-14.
[25]苟永刚. 应用DNA-SIP研究甘蔗//大豆间作系统参与氮素循环核心功能微生物多样性 [D]. 广州:华南农业大学, 2018.
[26]伏云珍,马琨,李倩,等. 马铃薯、玉米间作对土壤细菌多样性的影响 [J]. 中国生态农业学报(中英文), 2020, 28(11): 1715-1725.
[27]徐胜光,高召华,林丽,等. 氮素形态和光照强度对水稻表土及根际N2O排放的影响 [J]. 植物营养与肥料学报, 2016, 22(5): 1319-1328.
[28]李忠奎,丁亚茹,周应刚,等. 不同前作对植烟土壤养分含量、酶活性及细菌群落结构的影响 [J]. 云南农业大学学报(自然科学), 2020, 35(4): 708-716.
[29]王平平. 改性生物炭对莠去津和烟嘧磺隆的吸附机理及环境行为影响研究 [D]. 北京:中国农业科学院, 2020.
[30]杨恩东,崔丹曦,汪维云. 马赛菌属细菌研究进展 [J]. 微生物学通报, 2019, 46(6): 1537-1548.
[31]肖蓉,文也,唐少军,等. 土壤样品中黏细菌的分离鉴定及其生物活性检测 [J]. 微生物学报, 2014, 54(12): 1429-1437.
[32]LI Z, YE X, LIU M, et al. A novel outer membrane β-1,6-glucanase is deployed in the predation of fungi by myxobacteria [J]. The ISME Journal, 2019, 13(9): 1-13.
[33]张璐璐. 基于有机缓释碳源的反硝化生物滤池对污水深度脱氮效果研究 [D]. 成都:成都理工大学, 2019.
[34]张娅. 三维电极生物膜耦合硫铁同步脱氮除磷及去除PAEs研究 [D]. 北京:北京工业大学, 2016.
[35]李爽. 水稻土厌氧硝酸盐还原耦合亚铁氧化与砷氧化机制 [D]. 广州:中国科学院大学(中国科学院广州地球化学研究所), 2018.
[36]褚翠伟. 杀草丹降解菌株Acidovorax sp. T1的分离鉴定、降解途径及关键酶基因克隆 [D]. 南京:南京农业大学, 2017.
[37]罗俊鹏. 多环芳烃降解菌的筛选、降解特性及其与化学氧化联合应用研究 [D]. 南昌:南昌大学, 2019.
[38]于洋洋,王广智,王卓然,等. 萘好氧降解污泥强化培养特性与降解效能研究 [J]. 环境科学与技术, 2017, 40(8): 128-133.
[39]廖娟,王钢,喻世刚,等. 利用Illumina MiSeq测序平台分析沐川乌骨黑鸡空肠微生物多样性[J].江苏农业科学,2020,48(24):178-182.
[40]刘怡南,温彬,陈再忠. 七彩神仙鱼脑组织转录组mRNAs差异表达分析[J].南方农业学报,2020,51(11):2827-2835.

备注/Memo

备注/Memo:
收稿日期:2021-03-20基金项目:国家自然科学基金项目(31872002、31772197)作者简介:黄博闻(1996-),男,江苏无锡人,硕士研究生,研究方向为农业环境。(E-mail)609939306@qq.com通讯作者:葛静,(E-mail)gejing@jaas.ac.cn;余向阳,(E-mail)yuxy@jaas.ac.cn
更新日期/Last Update: 2022-01-07